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Congenital hypothyroidism
Reviewed by Medicinsk Expert•Last updated: 2026-10-22•Condition

Congenital Hypothyroidism

Congenital hypothyroidism is a partial or complete loss of thyroid function affecting infants from birth. If left untreated, this condition can lead to intellectual disability and slow growth, but early intervention typically allows for normal development.

Overview

Congenital hypothyroidism is a partial or complete loss of function of the thyroid gland (hypothyroidism) that affects infants from birth (congenital). The thyroid gland is a butterfly-shaped tissue in the lower neck. It makes iodine-containing hormones that play an important role in regulating growth, brain development, and the rate of chemical reactions in the body (metabolism). People with congenital hypothyroidism have lower-than-normal levels of these important hormones.

Congenital hypothyroidism occurs when the thyroid gland fails to develop or function properly. In 80 to 85 percent of cases, the thyroid gland is absent, severely reduced in size (hypoplastic), or abnormally located. These cases are classified as thyroid dysgenesis. In the remainder of cases, a normal-sized or enlarged thyroid gland (goiter) is present, but production of thyroid hormones is decreased or absent. Most of these cases occur when one of several steps in the hormone synthesis process is impaired; these cases are classified as thyroid dyshormonogenesis. Less commonly, reduction or absence of thyroid hormone production is caused by impaired stimulation of the production process (which is normally done by a structure at the base of the brain called the pituitary gland), even though the process itself is unimpaired. These cases are classified as central (or pituitary) hypothyroidism.

Congenital hypothyroidism can also occur as part of syndromes that affect other organs and tissues in the body. These forms of the condition are described as syndromic. Some common forms of syndromic hypothyroidism include Pendred syndrome, Bamforth-Lazarus syndrome, and brain-lung-thyroid syndrome.

Symptoms

Signs and symptoms of congenital hypothyroidism result from the shortage of thyroid hormones. While some affected babies show no features of the condition, others may experience:

  • Decreased activity and sleeping more than normal
  • Difficulty feeding
  • Constipation
  • Intellectual disability (if untreated)
  • Slow growth (if untreated)

In the United States and many other countries, all hospitals test newborns for congenital hypothyroidism. If treatment begins in the first two weeks after birth, infants usually develop normally.

Frequency

Congenital hypothyroidism affects an estimated 1 in 2,000 to 4,000 newborns. For reasons that remain unclear, congenital hypothyroidism affects more than twice as many females as males.

Causes

Congenital hypothyroidism can be caused by a variety of factors, only some of which are genetic. The most common cause worldwide is a shortage of iodine in the diet of the mother and the affected infant. Iodine is essential for the production of thyroid hormones. Genetic causes account for about 15 to 20 percent of cases of congenital hypothyroidism.

The cause of the most common type of congenital hypothyroidism, thyroid dysgenesis, is usually unknown. Studies suggest that 2 to 5 percent of cases are inherited. Two of the genes involved in this form of the condition are PAX8 and TSHR. These genes play roles in the proper growth and development of the thyroid gland. Mutations in these genes prevent or disrupt normal development of the gland. The abnormal or missing gland cannot produce normal amounts of thyroid hormones.

Thyroid dyshormonogenesis results from mutations in one of several genes involved in the production of thyroid hormones. These genes include DUOX2, SLC5A5, TG, and TPO. Mutations in each of these genes disrupt a step in thyroid hormone synthesis, leading to abnormally low levels of these hormones. Mutations in the TSHB gene disrupt the synthesis of thyroid hormones by impairing the stimulation of hormone production. Changes in this gene are the primary cause of central hypothyroidism. The resulting shortage of thyroid hormones disrupts normal growth, brain development, and metabolism, leading to the features of congenital hypothyroidism.

Mutations in other genes that have not been as well characterized can also cause congenital hypothyroidism. Still other genes are involved in syndromic forms of the disorder.

Genes Associated with Congenital Hypothyroidism

  • DUOX2
  • PAX8
  • SLC26A4
  • SLC5A5
  • TG
  • TPO
  • TSHB
  • TSHR
  • DUOXA2
  • IYD
  • NKX2-5
  • THRA
  • TRHR

Inheritance Pattern

Most cases of congenital hypothyroidism are sporadic, which means they occur in people with no history of the disorder in their family.

When inherited, the condition usually has an autosomal recessive pattern, which means both copies of the gene in each cell have mutations. Typically, the parents of an individual with an autosomal recessive condition each carry one copy of the mutated gene, but they do not show signs and symptoms of the condition.

When congenital hypothyroidism results from mutations in the PAX8 gene or from certain mutations in the TSHR or DUOX2 gene, the condition has an autosomal dominant pattern of inheritance, which means one copy of the altered gene in each cell is sufficient to cause the disorder. In some of these cases, an affected person inherits the mutation from an affected parent. Other cases result from new (de novo) mutations in the gene that occur during the formation of reproductive cells (eggs or sperm) or in early embryonic development. These cases occur in people with no history of the disorder in their family.

Other Names for This Condition

  • CH
  • CHT
  • Congenital myxedema
  • Cretinism

Additional Resources

Genetic Testing Information

  • Genetic Testing Registry: Congenital hypothyroidism
  • Genetic Testing Registry: Deficiency of iodide peroxidase
  • Genetic Testing Registry: Hypothyroidism due to TSH receptor mutations
  • Genetic Testing Registry: Thyroid dyshormonogenesis 1
  • Genetic Testing Registry: Hypothyroidism, congenital, nongoitrous, 2
  • Genetic Testing Registry: Thyroglobulin synthesis defect
  • Genetic Testing Registry: Thyroid dyshormonogenesis 6

Genetic and Rare Diseases Information Center

  • Congenital hypothyroidism

Patient Support and Advocacy Resources

  • National Organization for Rare Disorders (NORD)

Clinical Trials

  • ClinicalTrials.gov

Catalog of Genes and Diseases from OMIM

  • HYPOTHYROIDISM, CONGENITAL, NONGOITROUS, 1; CHNG1
  • HYPOTHYROIDISM, CONGENITAL, NONGOITROUS, 2; CHNG2
  • THYROID DYSHORMONOGENESIS 1; TDH1
  • THYROID DYSHORMONOGENESIS 2A; TDH2A
  • THYROID DYSHORMONOGENESIS 5; TDH5
  • THYROID DYSHORMONOGENESIS 6; TDH6

Frequently Asked Questions

Screening is usually done between 24–48 hours after birth using a heel‑stick blood spot. An elevated TSH (or low T4) on the test suggests the baby’s thyroid is not producing enough hormone and warrants confirmatory testing and prompt treatment to prevent neurodevelopmental delay.
Before confirmatory labs, infants may appear unusually sleepy, have a puffy face, prolonged jaundice, a large tongue (macroglossia), or a hoarse cry. These signs are not specific but should prompt a pediatrician’s evaluation if they persist.
Infants are re‑checked every 1–2 weeks for the first month, then every 1–2 months until 6 months of age, and subsequently every 3–6 months. Labs include TSH and free T4; growth parameters, head circumference, and developmental milestones are also tracked at each visit.
Treatment is started as soon as the diagnosis is confirmed, often within the first two weeks of life. The usual initial dose is 10–15 µg/kg/day of liquid levothyroxine, divided into one or two doses, with adjustments based on follow‑up thyroid function tests.
Source: MedlinePlus, National Library of Medicine

MedlinePlus brings together authoritative health information from the National Library of Medicine (NLM), the National Institutes of Health (NIH), and other government agencies and health-related organizations.

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